What The Heck is a Virus?
Introduction
First, let me tell you what a virus is NOT. A virus is not
a bacterium, nor an independently-living organism. A virus
cannot survive in the absence of a living cell within
which to synthesize copies of itself (replicate).
Antibiotics do not harm a virus; it is for this reason
that treatment for the "flu" for example, is
mainly to help ease the symptoms of the illness rather
than to kill the organism which causes the "flu"
(Influenza virus Please see: What
the Heck is the "Flu"?).
Well then, what
IS it?
Now, is there a simple explanation which can define what a
virus IS? Hmmmm... that's actually a tough question. A
virus is not strictly alive.. nor is it strictly dead... A
virus has some fundamental information (genes made of DNA
or RNA) which allows it to make copies of itself. However,
the virus must be inside a living cell of some kind
before the information can be used. In fact, the
information won't be made available unless the virus
enters a living cell. It is this entrance of a virus into
a cell which is called a viral infection. Too, the virus
is very, very small relative to the size of a living cell.
Therefore, the information the virus can carry is actually
not enough to allow it to make copies (replicate). The
virus uses the cell's machinery and some of the cell's
enzymes to generate virus parts which are later assembled
into thousands of new, mature, infectious virus which can
leave the cell to infect other cells. Poliomyelitis
virus for example, may have over one million copies of
its basic genetic information (RNA) inside a single,
infected human intestinal mucosal cell.
What does a
virus look like?
Moving from the outside to the inside, here are some parts
of a virus which are common to many different kinds of
viruses: capsid, core, genetic material (DNA or RNA). The
capsid is the outer shell of the virus which encloses the
genetic material within. The capsid is actually made of
many, many identical individual proteins which are
assembled very precisely to form the capsid structure.
Sometimes there will be a protein core underneath the
capsid which also surrounds the genetic material. Some
viruses may have an additional covering on the outside
called an envelope. An envelope is kind of like
skin around the outside of the virus. The envelope is
actually a lipid bilayer (membrane) with proteins embedded
within the membrane. If you examine a baseball, take it
apart, you will see how some viruses are assembled. The
cover of the baseball (envelope), the tightly-woven thread
(capsid), and the rubber core (genetic material) can be
used to represent the parts of some viruses.
What do viruses
actually do?
All viruses only exist and make more viruses. And with the
possible exception of bacterial viruses which kill harmful
bacteria, all viruses appear to be harmful because their
replication leads to the death of the cell which the virus
entered. A virus enters a cell by first attaching to a
specific structure on the cell's surface via a specific
structure on the virus surface. Depending on the virus,
either the entire virus enters the cell, or perhaps only
the genetic material of the virus is injected into the
cell. In either case however, the ultimate result of viral
infection is the exposure of virus genetic material inside
the entered cell. Then, the virus material essentially
"takes over" the cell and nothing but viral
parts are made, which assemble into many complete viruses.
These viruses are mature and leave the cell either by a
process called "budding" (just one or a few
viruses at a time leave the cell) or by a process called lysis
(the cellular membrane ruptures and releases all of the
virus particles at once).
What things can
become infected by a virus
So far, there is not a living thing identified that
doesn't have some sort of susceptibility to a particular
virus. Plants, animals, bacteria - every living thing,
whether multicellular or single-celled, can be infected
with a virus specific for the organism. And, within a
species, there may be 100 or more different viruses which
can infect that species alone. So, whenever viruses are
discussed, they are discussed as being either plant,
animal or bacterial viruses - which means that an animal
virus only infects a certain animal, and a plant virus
only infects a particular plant. We say that a virus is specific
for a particular thing if the virus infects only that
thing. So, there are viruses which infect only humans
(smallpox), some which infect humans and one or two
additional kinds of animals (influenza), some which infect
only a particular kind of plant (tobacco mosaic virus),
and some which infect only a particular species of
bacteria (lambda bacteriophage which infects E. coli).
How many kinds
of viruses are there?
Viruses come in all shapes and sizes and have an enormous
array of different kinds of organization of basic genetic
material within them. And, it is the arrangement and type
of genetic material which is the method used for
sub-classification of a given group of viruses. For
example, the animal virus group can be sub-divided into
the following sub-groups: double-stranded DNA;
single-stranded DNA; double-stranded RNA; single-stranded
RNA, and, retroviruses (a very unique kind of
single-stranded RNA virus). An example of a human
double-stranded DNA virus is Epstein-Barr virus (EBV).
An example of a human single-stranded RNA virus is Influenza
virus, Type A). An example of a human retrovirus is Human
Immunodeficiency virus (HIV). As you can see, unlike
humans, the arrangement and kind of genetic material
within viruses can be very diverse. However, for all
viruses, regardless of the kind or arrangement of genetic
material, the virus is capable of replicating within a
living cell and can produce progeny (offspring) which are
usually absolutely identical to the original virus. You
may wish to take a look at David Sander's information
about viruses. Please see: David
Sander's Complete Virology Information, Tulane
Do viruses
change
Sometimes during the process of viral replication,
mutations occur. If the mutation is harmful, the new virus
particle might no longer be functional (infectious).
However, because a given virus can generate many,. many
copies of itself, even if 200,000 particles are no good,
100 might still be just fine. Further, some mutations
don't lead to harm to the virus, but instead lead to a
functional but now brand-new strain of virus (Influenza
virus can do this; consequently, there are several
different strains of this virus which have to be
identified each year in order to make a vaccine against
the particular strain which might cause the
"flu").
What protects
things against viral infection?
Humans are protected in a couple of ways. First, if a
particular virus infects one or more cells of a given
tissue in our body, the infection leads to the synthesis
and secretion of substances called interferons.
Interferons are proteins and may be designated as alpha,
beta, or gamma interferon). These proteins interact with
adjacent cells which help adjacent cells become more
resistant to infection by the virus. Sometimes, this
resistance isn't quite good enough to prevent the spread
of the virus to more and more cells, and we begin to feel
sick (we are now experiencing a disease caused by the
viral infection). Now however, the body's immune system
takes over and begins to fight the infection by killing
the virus on the outside of the cells, and kills the
infected cells, too. The killing of the infected cells
prevents the spread of the virus, since as was stated
above, a virus requires a living cell in order for the
virus to be able to replicate. Eventually, the virus will
be completely removed, and we'll get over the illness. HIV
is an exception to this situation because HIV infects
cells of the immune system which are necessary to kill the
infected cells. So, although HIV does not itself directly
cause the condition known as AIDS, the eventual death of
immune cells due to infection with HIV allows other
infections to harm a person.
Recently, there
have been agents designed in the laboratory and isolated
from natural sources which are being used to fight certain
viral infections. These agents are not called antibiotics
however, since they are effective only for viruses and
have not been isolated from other organisms capable of
killing a virus. So far, no agents have been identified
which are secreted by a cell which actually kills a virus.
You may be familiar with the drug called Acyclovir
which is used to inhibit the replication of Herpesvirus;
and, AZT and HIV protease inhibitors which are used to
inhibit the replication of HIV.
Plants are
protected from certain viruses by substances which coat
leaves and stems and "closing-off" systems which
generate a walled-off area within the plant at the source
of the infection. Bacteria can be protected from
bacterial-specific viruses through the action of enzymes
inside the bacterium's cell. However, if a bacterial virus
(called a bacteriophage) infects one cell, usually within
a very short time, all of the bacterial cells will be
killed. If there are no other bacterial cells of that
particular species around for that particular virus,
however, the virus will die, too.
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This
article was written by John
(Jack) C. Brown, Professor, Department of
Molecular Biosciences, University of Kansas,
Lawrence, Kansas. This is Dr. Brown's
statement about his writings: I have tried
to be as accurate as possible within the limits of
providing the information in a
"reader-friendly" format. Therefore,
please forgive any latitude I have taken with the
pure science discussed. With these caveats in
mind: in keeping with the spirit of the
"Web" and Internet, and the fact that
this institution has been established for, and is
devoted to, learning, all information on these
Pages is for anyone's use, as long as the use is
for non-profit only, and this statement
accompanies any copies. Copyright 2001, John
(Jack) C. Brown, Professor, Department of
Molecular Biosciences, University of Kansas,
Lawrence, Kansas |
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